Gene

gdpd2

ID

ZDB-GENE-081107-62

Name

glycerophosphodiester phosphodiesterase domain containing 2

Symbol

gdpd2 Nomenclature History

Previous Names

si:dkey-31j3.9 (1)

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to enable glycerophosphodiester phosphodiesterase activity. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human GDPD2 (glycerophosphodiester phosphodiesterase domain containing 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With gdpd2 Human Ortholog

No data available

Associated With gdpd2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR030395	Glycerophosphodiester phosphodiesterase domain
Homologous_superfamily	IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily

Domain Details Per Protein

Protein	Length	Glycerophosphodiester phosphodiesterase domain	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
UniProtKB:A0A8M9PND0 InterPro	450
UniProtKB:E9QGJ5 InterPro	523
UniProtKB:A0A8M9Q5B7 InterPro	319
UniProtKB:A0A8M3AGS9 InterPro	450
UniProtKB:A0A8M9Q5B5 InterPro	523
UniProtKB:E7FGP0 InterPro	514
UniProtKB:A0A8M9QPI6 InterPro	361
UniProtKB:A0A8M9PUJ2 InterPro	361
UniProtKB:A0A8M9PBS7 InterPro	514

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	gdpd2-201 (1) Ensembl	Ensembl	3,908 nt	Select Tool ZFIN BLAST
mRNA	gdpd2-203 (1) Ensembl	Ensembl	3,233 nt	Select Tool ZFIN BLAST
mRNA	gdpd2-204 (1) Ensembl	Ensembl	3,854 nt	Select Tool ZFIN BLAST
ncRNA	gdpd2-002 (1) Ensembl	Ensembl	565 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations