Gene

rbsn

ID
ZDB-GENE-100525-1
Name
rabenosyn, RAB effector
Symbol
rbsn Nomenclature History
Previous Names
  • si:ch73-317k23.2
  • si:dkeyp-87a12.4
  • zfyve20
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
null
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa18934Allele with one point mutationUnknownPremature StopENU
1 - 1 of 1
Show
Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-rbsnN/AMochizuki et al., 2018
1 - 1 of 1
Show
Human Disease
Associated With rbsn Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Kariminejad neurodevelopmental syndrome 620937
Myelofibrosis, congenital, with anemia, neutropenia, developmental delay, and ocular abnormalities 620939
1 - 2 of 2
Associated With rbsn Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000306 FYVE zinc finger
Domain IPR013087 Zinc finger C2H2-type
Domain IPR017455 Zinc finger, FYVE-related
Domain IPR021565 Rabenosyn, Rab binding domain
Family IPR052727 Rab4/Rab5 effector domain-containing protein
1 - 5 of 8 Show all
Domain Details Per Protein
Protein Additional Resources Length FYVE zinc finger Rab4/Rab5 effector domain-containing protein Rabenosyn, Rab binding domain Rabenosyn, Rab binding domain superfamily Zinc finger C2H2-type Zinc finger, FYVE/PHD-type Zinc finger, FYVE-related Zinc finger, RING/FYVE/PHD-type
UniProtKB:A0A8N7T814 InterPro 782
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 8
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rbsn-202 (1)
Ensembl
Ensembl 1,872 nt
ZFIN BLAST
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-317K23ZFIN Curated Data
Contained inBACDKEYP-87A12ZFIN Curated Data
1 - 2 of 2
Show
Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_068223241 (1)3624 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CR385042 (1)189958 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8N7T814 (1)782 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanRBSN3
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseRbsn6
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
1 - 3 of 3
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.