Gene

eva1bb

ID

ZDB-GENE-080204-108

Name

eva-1 homolog Bb (C. elegans)

Symbol

eva1bb Nomenclature History

Previous Names

fam176bb
si:dkey-206d17.1
zgc:172191

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to be located in membrane. Orthologous to human EVA1B (eva-1 homolog B).

Genome Resources

Note

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

No data available

Sequence Targeting Reagents

No data available

Human Disease

Associated With eva1bb Human Ortholog

No data available

Associated With eva1bb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR039500	EVA1 domain
Family	IPR052461	EVA1 A/B

Domain Details Per Protein

Protein	Additional Resources	Length	EVA1 A/B	EVA1 domain
UniProtKB:A9JRD7	InterPro	163

Transcripts

Genome Browsers

Genome Build: GRCz11Chromosome: 19

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	eva1bb-201 (1) Ensembl	Ensembl		2,390 nt	Select Tool ZFIN BLAST
mRNA	eva1bb-202 (1) Ensembl	Ensembl		465 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

No data available

Marker Relationships

Relationship	Marker Type	Marker	Accession Numbers	Citations
Contained in	BAC	DKEY-206D17	CT030005	ZFIN Curated Data
Encodes	cDNA	MGC:172191	BC155621	ZFIN Curated Data

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Sequences

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001114461 (1)	2420 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CT030005 (1)	126285 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A9JRD7 (1)	163 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Species	Symbol	Chromosome	Accession #	Evidence
Human	EVA1B	1	Ensembl:ENSG00000142694 Gene:55194 HGNC:25558	Conserved genome location (synteny) (1) Amino acid sequence comparison (1)
Mouse	Eva1b	4	Ensembl:ENSMUSG00000050212 Gene:230752 MGI:1922063	Amino acid sequence comparison (1) Conserved genome location (synteny) (1)

Citations

Include unpublished citations

Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903

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