Gene
zmat4a
- ID
- ZDB-GENE-081104-333
- Name
- zinc finger, matrin-type 4a
- Symbol
- zmat4a Nomenclature History
- Previous Names
-
- si:dkey-173g15.1
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be located in nucleus. Is expressed in habenula; hindbrain; and retinal inner nuclear layer. Orthologous to human ZMAT4 (zinc finger matrin-type 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from Thisse et al., 2005
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu2451 (7 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000690 | Matrin/U1-C, C2H2-type zinc finger |
| Domain | IPR003604 | Matrin/U1-C-like, C2H2-type zinc finger |
| Domain | IPR013087 | Zinc finger C2H2-type |
| Domain | IPR022755 | Zinc finger, double-stranded RNA binding |
| Family | IPR051868 | Zinc finger protein 346 and matrin-type protein 4 |
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Domain Details Per Protein
| Protein | Additional Resources | Length | Matrin/U1-C, C2H2-type zinc finger | Matrin/U1-C-like, C2H2-type zinc finger | Zinc finger C2H2 superfamily | Zinc finger C2H2-type | Zinc finger, double-stranded RNA binding | Zinc finger protein 346 and matrin-type protein 4 |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M1RSK1 | InterPro | 283 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zmat4a-201
(1)
|
Ensembl | 807 nt | ||
| mRNA |
zmat4a-202
(1)
|
Ensembl | 1,159 nt | ||
| mRNA |
zmat4a-203
(1)
|
Ensembl | 675 nt | ||
| mRNA |
zmat4a-204
(1)
|
Ensembl | 177 nt | ||
| mRNA |
zmat4a-205
(1)
|
Ensembl | 450 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-264H3 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-173G15 | ZFIN Curated Data | |
| Encodes | EST | eu2451 | Thisse et al., 2005 |
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Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_003198634 (1) | |||
| Genomic | RefSeq:NW_018394577 (1) | |||
| Polypeptide | UniProtKB:A0A8M1RSK1 (1) | 283 aa |
No data available