ZFIN is now using GRCz12tu for Genomic Data
Gene
clec19a
- ID
- ZDB-GENE-080917-46
- Name
- C-type lectin domain containing 19A
- Symbol
- clec19a Nomenclature History
- Previous Names
-
- im:7161829
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable signaling receptor activity. Predicted to be located in membrane. Is expressed in heart rudiment; heart tube; lens; and solid lens vesicle. Orthologous to human CLEC19A (C-type lectin domain containing 19A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7161829 (7 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018378 | C-type lectin, conserved site |
| Domain | IPR001304 | C-type lectin-like |
| Domain | IPR033988 | CEL-1-like C-type lectin-like domain |
| Family | IPR050111 | C-type lectin and snaclec domain-containing protein |
| Homologous_superfamily | IPR016186 | C-type lectin-like/link domain superfamily |
| Homologous_superfamily | IPR016187 | C-type lectin fold |
Domain Details Per Protein
| Protein | Additional Resources | Length | CEL-1-like C-type lectin-like domain | C-type lectin and snaclec domain-containing protein | C-type lectin, conserved site | C-type lectin fold | C-type lectin-like | C-type lectin-like/link domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M6Z4X1 | InterPro | 200 | ||||||
| UniProtKB:A0A2R8RVX9 | InterPro | 207 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
clec19a-202
(1)
|
Ensembl | 1,249 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers