Gene

tnnt1

ID
ZDB-GENE-080723-27
Name
troponin T type 1 (skeletal, slow)
Symbol
tnnt1 Nomenclature History
Previous Names
  • zgc:193831
  • zgc:193865
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to contribute to calcium-dependent ATPase activity and tropomyosin binding activity. Predicted to be involved in cardiac muscle contraction; sarcomere organization; and skeletal muscle contraction. Predicted to localize to troponin complex. Human ortholog(s) of this gene implicated in nemaline myopathy 5. Is expressed in muscle and slow muscle cell. Orthologous to human TNNT1 (troponin T1, slow skeletal type).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tnnt1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
nemaline myopathy 5A Alliance Nemaline myopathy 5A, autosomal recessive, severe infantile 605355
nemaline myopathy 5B Alliance Nemaline myopathy 5B, autosomal recessive, childhood-onset 620386
nemaline myopathy 5C Alliance Nemaline myopathy 5C, autosomal dominant 620389
Associated With tnnt1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR001978 Troponin
Family IPR027707 Troponin T
Homologous_superfamily IPR038077 Troponin domain superfamily
Domain Details Per Protein
Protein Length Troponin Troponin domain superfamily Troponin T
UniProtKB:A0A8M9PZE1 266
UniProtKB:A0A8M9P738 259
UniProtKB:B3DG30 268
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tnnt1-201 (1) Ensembl 910 nt
mRNA tnnt1-202 (1) Ensembl 1,053 nt
mRNA tnnt1-203 (1) Ensembl 1,029 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations