ZFIN is now using GRCz12tu for Genomic Data
Gene
bicc1b
- ID
- ZDB-GENE-080522-3
- Name
- BicC family RNA binding protein 1b
- Symbol
- bicc1b Nomenclature History
- Previous Names
-
- bicc1
- zgc:110716
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz11
- Annotation Status
- Not in current annotation release
- Description
- Predicted to enable RNA binding activity. Human ortholog(s) of this gene implicated in diffuse cystic renal dysplasia. Orthologous to human BICC1 (BicC family RNA binding protein 1).
- Genome Resources
- Note
-
Maps to Gene ID: 571411 not in current annotation release.
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| diffuse cystic renal dysplasia | Alliance | {Renal dysplasia, cystic, susceptibility to} | 601331 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001660 | Sterile alpha motif domain |
| Domain | IPR004087 | K Homology domain |
| Domain | IPR004088 | K Homology domain, type 1 |
| Domain | IPR037974 | BICC1, SAM domain |
| Domain | IPR047549 | BICC1, first type I KH domain |
| Domain | IPR047553 | BICC1, third type I KH domain |
| Domain | IPR047554 | BICC1, second type I KH |
| Domain | IPR054727 | Protein bicaudal C homolog 1, KH-like domain |
| Homologous_superfamily | IPR013761 | Sterile alpha motif/pointed domain superfamily |
| Homologous_superfamily | IPR036612 | K Homology domain, type 1 superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | BICC1, first type I KH domain | BICC1, SAM domain | BICC1, second type I KH | BICC1, third type I KH domain | K Homology domain | K Homology domain, type 1 | K Homology domain, type 1 superfamily | Protein bicaudal C homolog 1, KH-like domain | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8N7TBW3 | InterPro | 850 | ||||||||||
| UniProtKB:Q567W0 | InterPro | 158 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
bicc1b-201
(1)
|
Ensembl | 1,377 nt | ||
| mRNA |
bicc1b-202
(1)
|
Ensembl | 1,746 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- No data available