Gene

dhx40

ID
ZDB-GENE-080507-1
Name
DEAH (Asp-Glu-Ala-His) box polypeptide 40
Symbol
dhx40 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to spliceosomal complex. Orthologous to human DHX40 (DEAH-box helicase 40).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Williams et al., 2016
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With dhx40 Human Ortholog
No data available
Associated With dhx40 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Domain IPR001650 Helicase, C-terminal domain-like
Domain IPR007502 Helicase-associated domain
Domain IPR011545 DEAD/DEAH box helicase domain
Domain IPR011709 DEAD-box helicase, OB fold
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR048333 Helicase associated domain (HA2), winged-helix domain
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length DEAD-box helicase, OB fold DEAD/DEAH box helicase domain DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site Helicase-associated domain Helicase associated domain (HA2), winged-helix domain Helicase, C-terminal domain-like Helicase superfamily 1/2, ATP-binding domain P-loop containing nucleoside triphosphate hydrolase
UniProtKB:A0A8M9NYI7 733
UniProtKB:A0A8M9PSL1 109
UniProtKB:A0A8M9PIH1 734
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA dhx40-201 (1) Ensembl 7,465 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations