Gene
camta1b
- ID
- ZDB-GENE-080229-1
- Name
- calmodulin binding transcription activator 1b
- Symbol
- camta1b Nomenclature History
- Previous Names
-
- camta1
- im:7144854
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Description
- Predicted to have sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in nonprogressive cerebellar ataxia with mental retardation. Orthologous to human CAMTA1 (calmodulin binding transcription activator 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7144854 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| nonprogressive cerebellar ataxia with mental retardation | Alliance | Cerebellar dysfunction with variable cognitive and behavioral abnormalities | 614756 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Binding_site | IPR000048 | IQ motif, EF-hand binding site |
| Domain | IPR002909 | IPT domain |
| Domain | IPR005559 | CG-1 DNA-binding domain |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR014756 | Immunoglobulin E-set |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036770 | Ankyrin repeat-containing domain superfamily |
| Repeat | IPR002110 | Ankyrin repeat |
Domain Details Per Protein
| Protein | Length | Ankyrin repeat | Ankyrin repeat-containing domain superfamily | CG-1 DNA-binding domain | Immunoglobulin E-set | Immunoglobulin-like fold | IPT domain | IQ motif, EF-hand binding site | P-loop containing nucleoside triphosphate hydrolase |
|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M9Q7V2
|
1540 | ||||||||
|
UniProtKB:A0A8M9QM43
|
1672 | ||||||||
|
UniProtKB:A0A8M6Z970
|
1673 | ||||||||
|
UniProtKB:A0A8M9PVP1
|
1666 | ||||||||
|
UniProtKB:A0A8M9Q7U3
|
1673 | ||||||||
|
UniProtKB:A0A8M9QI84
|
1666 | ||||||||
|
UniProtKB:A0A8M9QDS7
|
1672 |
| Type | Name | Annotation Method | Length (nt) | Analysis |
|---|---|---|---|---|
| mRNA |
camta1b-202
(1)
|
Havana | 9077 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance