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ZIRC
ZFIN ID: ZDB-GENE-080204-51
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Gene Name: ankyrin repeat and sterile alpha motif domain containing 3
Gene Symbol: anks3    Nomenclature History

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Previous Name: zgc:172142 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Is expressed in head; heart; and trunk. Orthologous to human ANKS3 (ankyrin repeat and sterile alpha motif domain containing 3).
Genome Resources: Alliance (1),  Gene:100136846 (1),  Ensembl(GRCz11):ENSDARG00000038557 (2)
GENE EXPRESSION
All Expression Data: Fig. 4 from Shamseldin et al., 2016
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3261 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa24546 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa37948 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa37949 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-anks3 N/A 2
    MO2-anks3 N/A 2
    PHENOTYPE
    Data: 4 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH anks3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH anks3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001660 (1)
  • InterPro:IPR002110 (1)
  • InterPro:IPR013761 (1)
  • InterPro:IPR020683 (1)
  • InterPro:IPR036770 (1)
  • PROSITE:PS50088 (1)
  • PROSITE:PS50105 (1)
  • PROSITE:PS50297 (1)
  • Pfam:PF00536 (1)
  • Pfam:PF12796 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA anks3-201 (1)    Ensembl 2891
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM anks3 No data available
    MARKER RELATIONSHIPS
    anks3 Contained in: [BAC] CH211-231F6 (1) (order this)
    anks3 Encodes: [cDNA] MGC:172142 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114565 (1)
    Select Tool
    Genomic GenBank:BX322798 (1) 109868 bp
    Select Tool
    Polypeptide UniProtKB:A8WG24 (1) 622 aa
    Select Tool
    Sequence Clusters UniGene:120640 (1)
    Sequence Information (all 10)
    ORTHOLOGY for anks3 ( Chr: 24 )
    CITATIONS (16)