ZFIN is now using GRCz12tu for Genomic Data
Gene
slc7a9
- ID
- ZDB-GENE-080116-2
- Name
- solute carrier family 7 member 9
- Symbol
- slc7a9 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable L-amino acid transmembrane transporter activity. Acts upstream of or within pronephros development. Predicted to be located in apical plasma membrane. Predicted to be active in plasma membrane. Is expressed in enterocyte; intestine; pronephric proximal convoluted tubule; and pronephros. Human ortholog(s) of this gene implicated in cystinuria. Orthologous to human SLC7A9 (solute carrier family 7 member 9).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Ellingsen et al., 2021
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Ellingsen et al., 2021
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| cystinuria | Alliance | Cystinuria | 220100 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Amino acid/polyamine transporter I | Cellular Amino Acid Transporter |
|---|---|---|---|---|
| UniProtKB:F1QGJ2 | InterPro | 492 | ||
| UniProtKB:A0AC58G572 | InterPro | 492 | ||
| UniProtKB:A0AC58G574 | InterPro | 492 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
slc7a9-204
(1)
|
Ensembl | 705 nt | ||
| mRNA |
slc7a9-201
(1)
|
Ensembl | 2,087 nt | ||
| mRNA |
slc7a9-202
(1)
|
Ensembl | 1,437 nt | ||
| mRNA |
slc7a9-203
(1)
|
Ensembl | 2,150 nt | ||
| mRNA |
slc7a9-205
(1)
|
Ensembl | 2,179 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers