Gene

lrch2

ID
ZDB-GENE-080114-1
Name
leucine-rich repeats and calponin homology (CH) domain containing 2
Symbol
lrch2 Nomenclature History
Previous Names
  • sb:eu904
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Orthologous to human LRCH2 (leucine rich repeats and calponin homology domain containing 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lrch2 Human Ortholog
No data available
Associated With lrch2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001715 Calponin homology domain
Family IPR050216 Leucine-rich repeat domain-containing protein
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Homologous_superfamily IPR036872 CH domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Calponin homology domain CH domain superfamily Leucine-rich repeat Leucine-rich repeat domain-containing protein Leucine-rich repeat domain superfamily Leucine-rich repeat, typical subtype
UniProtKB:A0A8M3AZV0 755
UniProtKB:A0A8M9Q9J5 719
UniProtKB:A0A8M9PRQ2 719
UniProtKB:A0A8M9QA99 732
UniProtKB:A0A8M1QLI1 732
UniProtKB:A0A8M3ASK2 742
UniProtKB:A0A8M9PYU6 755
UniProtKB:A0A8M9Q494 742
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lrch2-201 (1) Ensembl 1,842 nt
mRNA lrch2-202 (1) Ensembl 932 nt
mRNA lrch2-203 (1) Ensembl 643 nt
mRNA lrch2-204 (1) Ensembl 1,713 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations