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ZIRC
ZFIN ID: ZDB-GENE-071116-9
Gene Name: nucleotide-binding oligomerization domain containing 1
Gene Symbol: nod1
Sequence Ontology ID : SO:0000704

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Previous Name: NLR-A1 (1)

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have CARD domain binding activity and oligopeptide binding activity. Involved in defense response to bacterium and hatching behavior. Predicted to colocalize with the cytoplasm. Human  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb44 Insertion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb52 Insertion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • sa12613 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17969 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa28761 Point Mutation Unknown Premature Stop ENU
    sa39133 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. 2 from Hu et al., 2017
    Observed in:
    DISEASE ASSOCIATED WITH nod1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nod1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process defense response to bacterium (more)
    Cellular Component COLOCALIZES_WITH cytoplasm (more)
    Molecular Function CARD domain binding (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nod1-201 (1) 3049
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nod1 No data available
    MARKER RELATIONSHIPS
    nod1Contained in: [Fosmid] CH1073-143P5 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_002665060 (1)
    Genomic GenBank:CU929399 (1) 42381bp
    Select Tool
    Polypeptide UniProtKB:X1WGQ4 (1) 903aa
    Sequence Information (all 10)
    ORTHOLOGY for nod1 (Chr: 16)
    CITATIONS (33)