Gene

arhgap20

ID
ZDB-GENE-071015-1
Name
Rho GTPase activating protein 20
Symbol
arhgap20 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to enable GTPase activator activity. Predicted to act upstream of or within regulation of Rho protein signal transduction and signal transduction. Orthologous to human ARHGAP20 (Rho GTPase activating protein 20).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa41437Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
sa41438Allele with one point mutationUnknownSplice SiteENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
sa45359Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With arhgap20 Human Ortholog
No data available
Associated With arhgap20 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000159 Ras-associating domain
Domain IPR000198 Rho GTPase-activating protein domain
Domain IPR047886 ARHGAP20-like, RhoGAP domain
Domain IPR047887 ARHGAP20, PH domain
Domain IPR047888 ARHGAP20, Ras-associating domain
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Domain Details Per Protein
Protein Additional Resources Length ARHGAP20-like, RhoGAP domain ARHGAP20, PH domain ARHGAP20, Ras-associating domain PH-like domain superfamily Ras-associating domain Rho GTPase-activating protein domain Rho GTPase activation protein Ubiquitin-like domain superfamily
UniProtKB:A0A8M9PSX5 InterPro 907
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 9
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA arhgap20-201 (1)
Ensembl
Ensembl 3,387 nt
ZFIN BLAST
ncRNA arhgap20-002 (1)
Ensembl
Ensembl 737 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-46K9
Has ArtifactESTfk54b10
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_001336727 (1)3419 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX537139 (1)243063 nt
MegaBLAST
PolypeptideUniProtKB:A0A8M9PSX5 (1)907 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanARHGAP2011
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
TSV
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