Gene
cnot6b
- ID
- ZDB-GENE-071004-97
- Name
- CCR4-NOT transcription complex, subunit 6b
- Symbol
- cnot6b Nomenclature History
- Previous Names
-
- zgc:171797
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Description
- Predicted to have poly(A)-specific ribonuclease activity. Predicted to be involved in nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to CCR4-NOT complex; cytoplasm; and nucleus. Orthologous to human CNOT6 (CCR4-NOT transcription complex subunit 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR005135 | Endonuclease/exonuclease/phosphatase |
| Domain | IPR034966 | CCR4-NOT transcription complex subunit 6 |
| Family | IPR050410 | CCR4/nocturin mRNA turnover and transcription |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Homologous_superfamily | IPR036691 | Endonuclease/exonuclease/phosphatase superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Length | CCR4/nocturin mRNA turnover and transcription | CCR4-NOT transcription complex subunit 6 | Endonuclease/exonuclease/phosphatase | Endonuclease/exonuclease/phosphatase superfamily | Leucine-rich repeat | Leucine-rich repeat domain superfamily | Leucine-rich repeat, typical subtype |
|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A8E4T0
|
558 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cnot6b-201
(1)
|
Ensembl | 8,351 nt |
Interactions and Pathways
No data available
Plasmids
No data available