Gene
si:ch211-141e20.2
- ID
- ZDB-GENE-070912-75
- Name
- si:ch211-141e20.2
- Symbol
- si:ch211-141e20.2 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to be involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in plasma membrane. Predicted to be active in adherens junction.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013106 | Immunoglobulin V-set domain |
| Domain | IPR013162 | CD80-like, immunoglobulin C2-set |
| Family | IPR051427 | Nectin and Nectin-like |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | CD80-like, immunoglobulin C2-set | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin V-set domain | Nectin and Nectin-like |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AW08 | InterPro | 424 | |||||||
| UniProtKB:A0AB32TVY6 | InterPro | 399 | |||||||
| UniProtKB:A0AB32TYH7 | InterPro | 504 | |||||||
| UniProtKB:A0AB32U077 | InterPro | 428 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-141e20.2-201
(1)
|
Ensembl | 1,267 nt | ||
| mRNA |
si:ch211-141e20.2-202
(1)
|
Ensembl | 1,152 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-141E20 | ZFIN Curated Data |
1 - 1 of 1
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_068223587 (1) | 12034 nt | ||
| Genomic | GenBank:BX677668 (1) | 182809 nt | ||
| Polypeptide | UniProtKB:A0AB32TYH7 (1) | 504 aa |
No data available