ZFIN is now using GRCz12tu for Genomic Data
Gene
kcnn1a
- ID
- ZDB-GENE-070912-703
- Name
- potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a
- Symbol
- kcnn1a Nomenclature History
- Previous Names
-
- si:rp71-39b20.3
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable calmodulin binding activity and small conductance calcium-activated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within monoatomic ion transmembrane transport. Predicted to be located in Z disc and membrane. Predicted to be active in neuron projection; neuronal cell body; and plasma membrane. Is expressed in anterior neural tube; brain; and posterior lateral plate mesoderm. Orthologous to human KCNN1 (potassium calcium-activated channel subfamily N member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Silic et al., 2021
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Calmodulin-binding domain | Potassium channel, calcium-activated, SK | Potassium channel domain | SK, calmodulin-binding domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BIK5 | InterPro | 893 | ||||
| UniProtKB:A0A8M9QNQ2 | InterPro | 896 | ||||
| UniProtKB:A0A8M2BIZ6 | InterPro | 890 | ||||
| UniProtKB:A0A8M9QA92 | InterPro | 893 | ||||
| UniProtKB:A0A0R4INU5 | InterPro | 538 | ||||
| UniProtKB:A0A8M9QNT3 | InterPro | 544 | ||||
| UniProtKB:A0AB32U2W7 | InterPro | 775 | ||||
| UniProtKB:A0AB40E9H7 | InterPro | 890 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
kcnn1a-201
(1)
|
Ensembl | 6,209 nt | ||
| mRNA |
kcnn1a-202
(1)
|
Ensembl | 878 nt | ||
| mRNA |
kcnn1a-203
(1)
|
Ensembl | 1,864 nt |
Interactions and Pathways
No data available
Plasmids