Gene

trim45

ID

ZDB-GENE-070912-389

Name

tripartite motif containing 45

Symbol

trim45 Nomenclature History

Previous Names

si:dkey-174k18.7 (1)

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in nervous system development. Predicted to be located in cytoplasm. Predicted to be active in nucleoplasm. Orthologous to human TRIM45 (tripartite motif containing 45).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trim45 Human Ortholog

No data available

Associated With trim45 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017907	Zinc finger, RING-type, conserved site
Domain	IPR000315	B-box-type zinc finger
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR027370	Zinc finger, RING-type, eukaryotic
Family	IPR047153	TRIM45/56/19-like
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR014756	Immunoglobulin E-set
Repeat	IPR001298	Filamin/ABP280 repeat
Repeat	IPR017868	Filamin/ABP280 repeat-like

Domain Details Per Protein

Protein	Additional Resources	Length	B-box-type zinc finger	Filamin/ABP280 repeat	Filamin/ABP280 repeat-like	Immunoglobulin E-set	Immunoglobulin-like fold	TRIM45/56/19-like	Zinc finger, RING/FYVE/PHD-type	Zinc finger, RING-type	Zinc finger, RING-type, conserved site	Zinc finger, RING-type, eukaryotic
UniProtKB:A0A8N7T6Z0	InterPro	574

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	trim45-201 (1) Ensembl	Ensembl		1,618 nt	Select Tool ZFIN BLAST
mRNA	trim45-202 (1) Ensembl	Ensembl		4,532 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations