ZFIN is now using GRCz12tu for Genomic Data
Gene
si:dkey-11f4.16
- ID
- ZDB-GENE-070912-357
- Name
- si:dkey-11f4.16
- Symbol
- si:dkey-11f4.16 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in immune response. Predicted to be located in membrane. Is expressed in pronephric duct. Orthologous to human CD58 (CD58 molecule).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cssl:d179 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013098 | Immunoglobulin I-set |
| Domain | IPR024303 | Natural killer cell receptor 2B4, immunoglobulin domain |
| Family | IPR015631 | CD2/SLAM family receptor |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | CD2/SLAM family receptor | Immunoglobulin I-set | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Natural killer cell receptor 2B4, immunoglobulin domain |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QB15 | InterPro | 782 | ||||||
| UniProtKB:A0A8M9QJX1 | InterPro | 717 | ||||||
| UniProtKB:A0A8M9Q4S1 | InterPro | 782 | ||||||
| UniProtKB:A0AB13AA95 | InterPro | 782 | ||||||
| UniProtKB:A0AB32TY64 | InterPro | 781 | ||||||
| UniProtKB:A0AB32U051 | InterPro | 717 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-11f4.16-201
(1)
|
Ensembl | 611 nt | ||
| mRNA |
si:dkey-11f4.16-202
(1)
|
Ensembl | 672 nt | ||
| mRNA |
si:dkey-11f4.16-203
(1)
|
Ensembl | 521 nt | ||
| mRNA |
si:dkey-11f4.16-205
(1)
|
Ensembl | 877 nt | ||
| mRNA |
si:dkey-11f4.16-206
(1)
|
Ensembl | 727 nt | ||
| ncRNA |
si:dkey-11f4.16-005
(1)
|
Ensembl | 586 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers