Gene
tmtc4
- ID
- ZDB-GENE-070912-148
- Name
- transmembrane O-mannosyltransferase targeting cadherins 4
- Symbol
- tmtc4 Nomenclature History
- Previous Names
-
- si:ch211-168k14.1
- wu:fc58d04
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to localize to integral component of membrane. Is expressed in central nervous system; neural plate; and retinal ganglion cell layer. Orthologous to human TMTC4 (transmembrane O-mannosyltransferase targeting cadherins 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7157210 (10 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| ?Deafness, autosomal recessive 122 | 620714 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Protein O-mannosyl-transferase TMTC | Protein O-mannosyl-transferase TMTC, DUF1736 | Tetratricopeptide-like helical domain superfamily | Tetratricopeptide repeat |
|---|---|---|---|---|---|
|
UniProtKB:A4FVI1
|
490 | ||||
|
UniProtKB:B0S6W0
|
739 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
tmtc4-201
(1)
|
Ensembl | 2,748 nt | ||
| mRNA |
tmtc4-202
(1)
|
Ensembl | 565 nt | ||
| mRNA |
tmtc4-204
(1)
|
Ensembl | 955 nt | ||
| mRNA |
tmtc4-205
(1)
|
Ensembl | 579 nt | ||
| mRNA |
tmtc4-206
(1)
|
Ensembl | 5,905 nt | ||
| mRNA |
tmtc4-207
(1)
|
Ensembl | 5,705 nt | ||
| ncRNA |
tmtc4-003
(1)
|
Ensembl | 723 nt |
Interactions and Pathways
No data available
Plasmids
No data available