ZFIN is now using GRCz12tu for Genomic Data
Gene
samd4a
- ID
- ZDB-GENE-070720-7
- Name
- sterile alpha motif domain containing 4A
- Symbol
- samd4a Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable mRNA binding activity. Predicted to be involved in nuclear-transcribed mRNA poly(A) tail shortening. Predicted to act upstream of or within negative regulation of translation and regulation of mRNA stability. Predicted to be located in cytoplasm; dendrite; and synapse. Predicted to be active in P-body. Orthologous to human SAMD4A (sterile alpha motif domain containing 4A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001660 | Sterile alpha motif domain |
| Domain | IPR037634 | Protein Smaug, SAM domain |
| Domain | IPR058599 | SMAUG/ZCCHC2-like, PHAT domain |
| Family | IPR050897 | SMAUG/VTS1 RNA-binding |
| Homologous_superfamily | IPR013761 | Sterile alpha motif/pointed domain superfamily |
| Homologous_superfamily | IPR037093 | Smaug, PHAT domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Protein Smaug, SAM domain | Smaug, PHAT domain superfamily | SMAUG/VTS1 RNA-binding | SMAUG/ZCCHC2-like, PHAT domain | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AU41 | InterPro | 684 | ||||||
| UniProtKB:X1WG96 | InterPro | 685 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
samd4a-201
(1)
|
Ensembl | 2,067 nt | ||
| mRNA |
samd4a-202
(1)
|
Ensembl | 8,955 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers