ZFIN is now using GRCz12tu for Genomic Data
Gene
ppfia4
- ID
- ZDB-GENE-070720-14
- Name
- PTPRF interacting protein alpha 4
- Symbol
- ppfia4 Nomenclature History
- Previous Names
-
- zgc:165463
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in synapse organization. Predicted to be located in cytoplasm. Predicted to be active in presynaptic active zone. Orthologous to human PPFIA4 (PPFI scaffold protein A4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001660 | Sterile alpha motif domain |
| Domain | IPR037620 | Liprin-alpha, SAM domain 1 |
| Domain | IPR037621 | Liprin-alpha, SAM domain 2 |
| Domain | IPR037622 | Liprin-alpha, SAM domain 3 |
| Domain | IPR057892 | Liprin-alpha, CC2 domain |
| Family | IPR029515 | Liprin |
| Homologous_superfamily | IPR013761 | Sterile alpha motif/pointed domain superfamily |
Domain Details Per Protein
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ppfia4-201
(1)
|
Ensembl | 4,368 nt | ||
| mRNA |
ppfia4-202
(1)
|
Ensembl | 4,331 nt | ||
| mRNA |
ppfia4-203
(1)
|
Ensembl | 4,367 nt | ||
| mRNA |
ppfia4-204
(1)
|
Ensembl | 2,768 nt | ||
| mRNA |
ppfia4-205
(1)
|
Ensembl | 6,785 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers