ZFIN is now using GRCz12tu for Genomic Data
Gene

ppfia4

ID
ZDB-GENE-070720-14
Name
PTPRF interacting protein alpha 4
Symbol
ppfia4 Nomenclature History
Previous Names
  • zgc:165463
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to be involved in synapse organization. Predicted to be located in cytoplasm. Predicted to be active in presynaptic active zone. Orthologous to human PPFIA4 (PPFI scaffold protein A4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ppfia4 Human Ortholog
No data available
Associated With ppfia4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001660 Sterile alpha motif domain
Domain IPR057892 Liprin-alpha, CC2 domain
Homologous_superfamily IPR013761 Sterile alpha motif/pointed domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Liprin-alpha, CC2 domain Sterile alpha motif domain Sterile alpha motif/pointed domain superfamily
UniProtKB:A0A8M3B6V6 InterPro 1213
UniProtKB:A0A8M9QHG8 InterPro 1209
UniProtKB:B0S6H8 InterPro 1211
UniProtKB:A0A8M9QLF9 InterPro 1212
UniProtKB:A0A8M3B411 InterPro 1206
UniProtKB:A0A8M9PUM9 InterPro 1209
UniProtKB:A0A8M6Z101 InterPro 1197
UniProtKB:A0A8M3AXL8 InterPro 1201
UniProtKB:A0A8M9Q6Z6 InterPro 1204
UniProtKB:A0AB32U448 InterPro 1152
UniProtKB:A0AC58GNX1 InterPro 1202
UniProtKB:A0AC58GNX3 InterPro 1213
UniProtKB:A0AC58GNX6 InterPro 1201
UniProtKB:A0AC58GNX7 InterPro 1202
UniProtKB:A0AC58GNY1 InterPro 1192
UniProtKB:A0AC58GNY2 InterPro 1203
UniProtKB:A0AC58GNY4 InterPro 1198
UniProtKB:A0AC58GNY6 InterPro 1200
UniProtKB:A0AC58GNY8 InterPro 1191
UniProtKB:A0AC58GNY9 InterPro 1188
UniProtKB:A0AC58GNZ0 InterPro 1194
UniProtKB:A0AC58GNZ1 InterPro 1187
UniProtKB:A0AC58GNZ4 InterPro 1200
UniProtKB:A0AC58GNZ5 InterPro 1197
UniProtKB:A0AC58GNZ6 InterPro 1190
UniProtKB:A0AC58GNZ7 InterPro 1184
UniProtKB:A0AC58GNZ9 InterPro 1127
UniProtKB:A0AC58GP00 InterPro 1141
UniProtKB:A0AC58GP01 InterPro 1144
UniProtKB:A0AC58GP03 InterPro 1205
UniProtKB:A0AC58GP04 InterPro 1123
UniProtKB:A0AC58GP05 InterPro 1140
UniProtKB:A0AC58GP06 InterPro 719
UniProtKB:A0AC58GP08 InterPro 1205
UniProtKB:A0AC58GP10 InterPro 1145
UniProtKB:A0AC58GP11 InterPro 1131
UniProtKB:A0AC58GP20 InterPro 1148
UniProtKB:A0AC58GP24 InterPro 1188
UniProtKB:A0AC58GP34 InterPro 712
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ppfia4-201 (1)
Ensembl
Ensembl 4,368 nt
ZFIN BLAST
mRNA ppfia4-202 (1)
Ensembl
Ensembl 4,331 nt
ZFIN BLAST
mRNA ppfia4-203 (1)
Ensembl
Ensembl 4,367 nt
ZFIN BLAST
mRNA ppfia4-204 (1)
Ensembl
Ensembl 2,768 nt
ZFIN BLAST
mRNA ppfia4-205 (1)
Ensembl
Ensembl 6,785 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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