Gene

emid1

ID

ZDB-GENE-070705-40

Name

EMI domain containing 1

Symbol

emid1 Nomenclature History

Previous Names

si:ch211-149d1.5

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to localize to extracellular matrix and extracellular space. Orthologous to human EMID1 (EMI domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With emid1 Human Ortholog

No data available

Associated With emid1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR011489	EMI domain
Family	IPR050149	Collagen superfamily
Family	IPR050392	Collagen/C1q domain-containing
Repeat	IPR008160	Collagen triple helix repeat

Domain Details Per Protein

Protein	Length	Collagen/C1q domain-containing	Collagen superfamily	Collagen triple helix repeat	EMI domain
UniProtKB:A0A8M2BCG7 InterPro	479
UniProtKB:A0A8M1Q1L4 InterPro	475
UniProtKB:A0A8M2BCM6 InterPro	477

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	emid1-201 (1) Ensembl	Ensembl		2,111 nt	Select Tool ZFIN BLAST
mRNA	emid1-202 (1) Ensembl	Ensembl		1,995 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations