ZFIN is now using GRCz12tu for Genomic Data
Gene
cspg4ba
- ID
- ZDB-GENE-070705-337
- Name
- chondroitin sulfate proteoglycan 4ba
- Symbol
- cspg4ba Nomenclature History
- Previous Names
-
- cspg4b
- cspg4l
- si:dkey-193c22.2 (1)
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in nervous system development and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human CSPG4BP (chondroitin sulfate proteoglycan family member 4B, pseudogene).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Concanavalin A-like lectin/glucanase domain superfamily | CSPG repeat | FRAS1-related extracellular matrix | Laminin G domain |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BCP5 | InterPro | 2389 | ||||
| UniProtKB:A0AC58JLI9 | InterPro | 2322 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-193c22.2-201
(1)
|
Ensembl | 9,993 nt | ||
| mRNA |
si:dkey-193c22.2-202
(1)
|
Ensembl | 7,112 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers