ZFIN is now using GRCz12tu for Genomic Data
Gene
ppfibp2a
- ID
- ZDB-GENE-070705-277
- Name
- PPFIA binding protein 2a
- Symbol
- ppfibp2a Nomenclature History
- Previous Names
-
- si:dkey-105j11.1
- si:dkey-105j11.2
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in neuromuscular junction development. Predicted to be located in cytosol. Predicted to be active in presynaptic active zone. Orthologous to human PPFIBP2 (PPFIB scaffold protein 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001660 | Sterile alpha motif domain |
| Domain | IPR037617 | Liprin-beta-1/2, SAM domain 1 |
| Domain | IPR037618 | Liprin-beta-1/2, SAM domain 2 |
| Domain | IPR037619 | Liprin-beta-1/2, SAM domain 3 |
| Domain | IPR058914 | Liprin-beta-1/2, coiled-coil domain |
| Family | IPR029515 | Liprin |
| Homologous_superfamily | IPR013761 | Sterile alpha motif/pointed domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Liprin | Liprin-beta-1/2, coiled-coil domain | Liprin-beta-1/2, SAM domain 1 | Liprin-beta-1/2, SAM domain 2 | Liprin-beta-1/2, SAM domain 3 | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AUX8 | InterPro | 409 | |||||||
| UniProtKB:F1QBQ0 | InterPro | 826 | |||||||
| UniProtKB:A0A8M3AKG5 | InterPro | 747 | |||||||
| UniProtKB:A0A2R8RPR2 | InterPro | 815 | |||||||
| UniProtKB:A0AB32TAE7 | InterPro | 833 | |||||||
| UniProtKB:A0AB32TC87 | InterPro | 822 | |||||||
| UniProtKB:A0AB32TDS0 | InterPro | 717 | |||||||
| UniProtKB:A0AC58HWU2 | InterPro | 501 | |||||||
| UniProtKB:A0AC58HWU4 | InterPro | 815 | |||||||
| UniProtKB:A0AC58HWU9 | InterPro | 501 | |||||||
| UniProtKB:A0AC58HWX1 | InterPro | 501 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ppfibp2a-201
(1)
|
Ensembl | 4,814 nt | ||
| mRNA |
ppfibp2a-202
(1)
|
Ensembl | 2,170 nt | ||
| mRNA |
ppfibp2a-203
(1)
|
Ensembl | 609 nt | ||
| mRNA |
ppfibp2a-206
(1)
|
Ensembl | 4,781 nt | ||
| ncRNA |
ppfibp2a-003
(1)
|
Ensembl | 369 nt | ||
| ncRNA |
ppfibp2a-004
(1)
|
Ensembl | 937 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers