Gene
ppfibp2a
- ID
- ZDB-GENE-070705-277
- Name
- PPFIA binding protein 2a
- Symbol
- ppfibp2a Nomenclature History
- Previous Names
-
- si:dkey-105j11.1
- si:dkey-105j11.2
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Description
- Predicted to be involved in neuromuscular junction development. Predicted to be active in presynaptic active zone. Orthologous to human PPFIBP2 (PPFIA binding protein 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa9503 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa11866 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa16101 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa36672 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa36673 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa43125 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa43126 | Allele with one point mutation | Unknown | Splice Site | ENU |
1 - 7 of 7
Show
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | LAR-interacting protein, Liprin | Liprin-beta, SAM domain repeat 1 | Liprin-beta, SAM domain repeat 2 | Liprin-beta, SAM domain repeat 3 | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AUX8 | InterPro | 409 | ||||||
| UniProtKB:F1QBQ0 | InterPro | 826 | ||||||
| UniProtKB:A0A8M3AKG5 | InterPro | 747 | ||||||
| UniProtKB:A0A2R8RPR2 | InterPro | 815 | ||||||
| UniProtKB:A0AB32TAE7 | InterPro | 833 |
1 - 5 of 7 Show all
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ppfibp2a-201
(1)
|
Ensembl | 4,814 nt | ||
| mRNA |
ppfibp2a-202
(1)
|
Ensembl | 2,170 nt | ||
| mRNA |
ppfibp2a-203
(1)
|
Ensembl | 609 nt | ||
| mRNA |
ppfibp2a-206
(1)
|
Ensembl | 4,781 nt | ||
| ncRNA |
ppfibp2a-003
(1)
|
Ensembl | 369 nt |
1 - 5 of 6 Show all
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-105J11 | ZFIN Curated Data |
1 - 1 of 1
Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_068214912 (1) | 2839 nt | ||
| Genomic | GenBank:CT025546 (1) | 210488 nt | ||
| Polypeptide | UniProtKB:A0AB32TAE7 (1) | 833 aa |
- Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. (2016) The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48(4):427-37
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Haug, M.F., Gesemann, M., Lazovic, V., Neuhauss, S.C. (2015) Eumetazoan Cryptochrome Phylogeny and Evolution. Genome biology and evolution. 7(2):601-19
- Liu, C., Hu, J., Qu, C., Wang, L., Huang, G., Niu, P., Zhong, Z., Hong, F., Wang, G., Postlethwait, J.H., Wang, H. (2015) Molecular evolution and functional divergence of zebrafish (Danio rerio) cryptochrome genes. Scientific Reports. 5:8113
1 - 4 of 4
Show