Gene

myripa

ID

ZDB-GENE-070705-17

Name

myosin VIIA and Rab interacting protein a

Symbol

myripa Nomenclature History

Previous Names

si:ch211-106h4.9

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Predicted to have Rab GTPase binding activity; actin binding activity; and myosin binding activity. Predicted to be involved in intracellular protein transport. Predicted to localize to cortical actin cytoskeleton. Orthologous to human MYRIP (myosin VIIA and Rab interacting protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With myripa Human Ortholog

No data available

Associated With myripa Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006788	Rab effector MyRIP/Melanophilin
Domain	IPR010911	Rab-binding domain
Domain	IPR041282	FYVE-type zinc finger
Family	IPR051745	Intracellular Transport Effector
Homologous_superfamily	IPR011011	Zinc finger, FYVE/PHD-type
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type

Domain Details Per Protein

Protein	Length	FYVE-type zinc finger	Intracellular Transport Effector	Rab-binding domain	Rab effector MyRIP/Melanophilin	Zinc finger, FYVE/PHD-type	Zinc finger, RING/FYVE/PHD-type
UniProtKB:A0A8M9P9U6 InterPro	1111
UniProtKB:F1R8E9 InterPro	1173
UniProtKB:A0A8M9PLT6 InterPro	1153
UniProtKB:A0A8M9PF63 InterPro	1166

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-106h4.9-201 (1) Ensembl	Ensembl	8,335 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-106h4.9-202 (1) Ensembl	Ensembl	478 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-106h4.9-203 (1) Ensembl	Ensembl	578 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-106h4.9-204 (1) Ensembl	Ensembl	989 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-106h4.9-206 (1) Ensembl	Ensembl	3,288 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-106h4.9-004 (1) Ensembl	Ensembl	759 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations