Gene

rab39ba

ID
ZDB-GENE-070620-7
Name
RAB39B, member RAS oncogene family a
Symbol
rab39ba Nomenclature History
Previous Names
  • tmem230
  • zgc:165464
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to enable GTP binding activity; GTPase activity; and myosin V binding activity. Predicted to be involved in vesicle-mediated transport. Predicted to act upstream of or within Rab protein signal transduction. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Human ortholog(s) of this gene implicated in Waisman syndrome and non-syndromic X-linked intellectual disability 72. Orthologous to human RAB39B (RAB39B, member RAS oncogene family).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With rab39ba Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
non-syndromic X-linked intellectual disability 72 Alliance Intellectual developmental disorder, X-linked 72 300271
Waisman syndrome Alliance Waisman syndrome 311510
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Associated With rab39ba Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005225 Small GTP-binding domain
Family IPR001806 Small GTPase
Family IPR041818 Rab39
Family IPR050209 Rab GTPases family involved in membrane trafficking
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
1 - 5 of 5
Domain Details Per Protein
Protein Additional Resources Length P-loop containing nucleoside triphosphate hydrolase Rab39 Rab GTPases family involved in membrane trafficking Small GTPase Small GTP-binding domain
UniProtKB:A5PLA1 InterPro 213
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 21
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rab39ba-201 (1) Ensembl 1,367 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-173M3ZFIN Curated Data
EncodescDNAMGC:165464ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanRAB39BX
Amino acid sequence comparison (1)
MouseRab39bX
Amino acid sequence comparison (1)
Citations
1 - 5 of 5
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