Gene

hmces

ID

ZDB-GENE-070620-10

Name

5-hydroxymethylcytosine binding, ES cell specific

Symbol

hmces Nomenclature History

Previous Names

im:7137789
zgc:165500

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to have peptidase activity. Predicted to be involved in proteolysis. Orthologous to human HMCES (5-hydroxymethylcytosine binding, ES cell specific).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7137789 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With hmces Human Ortholog

No data available

Associated With hmces Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR003738	SOS response associated peptidase (SRAP)
Homologous_superfamily	IPR036590	SOS response associated peptidase-like

Domain Details Per Protein

Protein	Length	SOS response associated peptidase-like	SOS response associated peptidase (SRAP)
UniProtKB:A5PLB0 InterPro	353

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hmces-201 (1) Ensembl	Havana	1461 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	hmces-202 (1) Ensembl	Havana	786 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations