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ZIRC
ZFIN ID: ZDB-GENE-070615-29
Gene Name: caudal type homeobox 1 b
Gene Symbol: cdx1b    Nomenclature History

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Previous Names: caudal type homeodomain protein (1), zgc:165581

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Exhibits DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in several processes, including animal organ development; digestive tract development; and endoderm formation. Predicted to localize to the nucleus. Is expressed in several structures, including blastodisc; brain; germ ring; gut; and mesoderm. Orthologous to several human genes including CDX1 (caudal type homeobox 1).
Genome Resources: Alliance (1),  Gene:100004956 (1),  Ensembl(GRCz11):ENSDARG00000116139 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-cdx1b N/A 2
MO2-cdx1b N/A 1
MO3-cdx1b N/A 1
DISEASE ASSOCIATED WITH cdx1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cdx1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA-binding transcription factor activity (more)
GO Terms (all 20)
TRANSCRIPTS No data available
INTERACTIONS AND PATHWAYS
SignaFish
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM cdx1b
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(krt5:cdx1b-EGFP) krt5 cdx1bEGFP Danio rerio 1 3
MARKER RELATIONSHIPS
cdx1b Encodes: [cDNA] MGC:165581 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001098762 (1) 1934 bp
Polypeptide UniProtKB:A5PLE8 (1) 255 aa
Sequence Clusters UniGene:111219 (1)
Sequence Information (all 10)
ORTHOLOGY for cdx1b ( Chr: 21 )
CITATIONS (25)