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ZIRC
ZFIN ID: ZDB-GENE-070613-1
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Gene Name: plexin A3
Gene Symbol: plxna3
Sequence Ontology ID : SO:0000704

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Previous Names: set, sidetracked, vermicelli (1), vmc (1)

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits protein homodimerization activity. Involved in embryonic skeletal joint morphogenesis and nervous system development. Localizes to the membrane. Orthologous to human PLXNA3 (plexin A3).
GENE EXPRESSION
All Expression Data: 8 figures from 6 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016252Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la016463Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la016464Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la026705Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la026706Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la026708Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la026709Tg Transgenic Insertion Unknown Unknown DNA
    la029523Tg Transgenic Insertion Unknown Unknown DNA
    la029524Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • p13umal Point Mutation Unknown Premature Stop ENU
    p24cree Unknown Unknown Unknown ENU
    p55emcf Unknown Unknown Unknown ENU
    rw260 Point Mutation Unknown Premature Stop ENU
    rw314 Point Mutation Unknown Missense ENU
    rw413 Point Mutation Unknown Missense ENU
    sa10020 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa34308 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa34309 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa34310 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa41125 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE
    Data: 15 figures from 9 publications
    Observed in:
    DISEASE ASSOCIATED WITH plxna3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH plxna3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon extension (more)
    Cellular Component membrane (more)
    Molecular Function protein homodimerization activity (more)
    GO Terms (all 22)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001627 (1)
  • InterPro:IPR002165 (1)
  • InterPro:IPR002909 (1)
  • InterPro:IPR008936 (1)
  • InterPro:IPR013548 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR016201 (1)
  • InterPro:IPR031148 (1)
  • InterPro:IPR036352 (1)
  • InterPro:IPR041019 (1)
  • InterPro:IPR041362 (1)
    		•
  • PROSITE:PS51004 (1)
    		•
  • Pfam:PF01403 (1)
  • Pfam:PF01437 (1)
  • Pfam:PF01833 (1)
  • Pfam:PF08337 (1)
  • Pfam:PF17960 (1)
  • Pfam:PF18020 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA plxna3-201 (1) 6597
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM plxna3 No data available
    MARKER RELATIONSHIPS
    plxna3Contained in: [BAC] DKEY-7I23 (1) (order this), DKEY-14I10 (1) (order this), DKEY-229J6 (1) (order this)
    plxna3Encodes: [cDNA] MGC:195307 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001098489 (1) 6210bp
    Select Tool
    Genomic GenBank:BX284664 (1) 228202bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0A0MPG5 (1) 1892aa
    Select Tool
    Sequence Clusters UniGene:80739 (1)
    Sequence Information (all 25)
    OTHER plxna3 GENE PAGES
  • Alliance (1)
  • Gene:567422 (1)
  • VEGA:OTTDARG00000026300 (1)
  • Ensembl(GRCz11):ENSDARG00000007172 (2)
    • ORTHOLOGY for plxna3 (Chr: 8)
    CITATIONS (50)