Gene
vps13c
- ID
- ZDB-GENE-070426-4
- Name
- vacuolar protein sorting 13 homolog C
- Symbol
- vps13c Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to be involved in mitochondrion organization; protein retention in Golgi apparatus; and protein targeting to vacuole. Human ortholog(s) of this gene implicated in Parkinson's disease 23. Orthologous to human VPS13C (vacuolar protein sorting 13 homolog C).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from O'Hare et al., 2016
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Parkinson's disease 23 | Alliance | Parkinson disease 23, autosomal recessive, early onset | 616840 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Vacuolar protein sorting-associated protein 13 | Vacuolar protein sorting-associated protein 13, N-terminal domain | Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain |
|---|---|---|---|---|---|
| UniProtKB:A0A8M9Q2G3 | InterPro | 3695 | |||
| UniProtKB:A0A8M9PZ34 | InterPro | 3711 | |||
| UniProtKB:A0A8M9Q2F4 | InterPro | 3695 | |||
| UniProtKB:A0A8M9QCR6 | InterPro | 3623 | |||
| UniProtKB:A0A8M9QHS1 | InterPro | 3627 | |||
| UniProtKB:A0A8M9PRV5 | InterPro | 3739 | |||
| UniProtKB:A0A8M9PPS2 | InterPro | 3739 | |||
| UniProtKB:A0A8M9QHR8 | InterPro | 3754 | |||
| UniProtKB:A0A8M9QCR2 | InterPro | 3751 | |||
| UniProtKB:A0A8M9Q8M3 | InterPro | 3711 | |||
| UniProtKB:A0A8M9PPR8 | InterPro | 3750 | |||
| UniProtKB:A0A8M9P9K9 | InterPro | 3755 | |||
| UniProtKB:A0A8M9Q2F8 | InterPro | 3743 | |||
| UniProtKB:A0A8M9Q8L8 | InterPro | 3755 | |||
| UniProtKB:A0A8M9PKS2 | InterPro | 3751 | |||
| UniProtKB:A0A8M9PRV0 | InterPro | 3750 | |||
| UniProtKB:A0A8M9P9L4 | InterPro | 3627 | |||
| UniProtKB:A0A8M9Q2E9 | InterPro | 3743 | |||
| UniProtKB:A0A8M9PKS9 | InterPro | 3623 | |||
| UniProtKB:A0AB32THT3 | InterPro | 3754 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
vps13c-201
(1)
|
Ensembl | 13,930 nt | ||
| ncRNA |
vps13c-003
(1)
|
Ensembl | 641 nt | ||
| ncRNA |
vps13c-005
(1)
|
Ensembl | 844 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance