ZFIN is now using GRCz12tu for Genomic Data
Gene
rasef2
- ID
- ZDB-GENE-070424-92
- Name
- RAS and EF-hand domain containing 2
- Symbol
- rasef2 Nomenclature History
- Previous Names
-
- zgc:162879
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in perinuclear region of cytoplasm. Is expressed in blastodisc.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Binding_site | IPR018247 | EF-Hand 1, calcium-binding site |
| Domain | IPR002048 | EF-hand domain |
| Domain | IPR005225 | Small GTP-binding domain |
| Family | IPR001806 | Small GTPase |
| Family | IPR050227 | Ras-related protein Rab |
| Homologous_superfamily | IPR011992 | EF-hand domain pair |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Additional Resources | Length | EF-Hand 1, calcium-binding site | EF-hand domain | EF-hand domain pair | P-loop containing nucleoside triphosphate hydrolase | Ras-related protein Rab | Small GTPase | Small GTP-binding domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A5WW21 | InterPro | 663 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zgc:162879-201
(1)
|
Ensembl | 2,570 nt | ||
| ncRNA |
zgc:162879-002
(1)
|
Ensembl | 594 nt | ||
| ncRNA |
zgc:162879-003
(1)
|
Ensembl | 748 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers