ZFIN is now using GRCz12tu for Genomic Data
Gene
rasef2
- ID
- ZDB-GENE-070424-92
- Name
- RAS and EF-hand domain containing 2
- Symbol
- rasef2 Nomenclature History
- Previous Names
-
- zgc:162879
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in zymogen granule exocytosis. Predicted to be located in Golgi apparatus and endosome. Is expressed in blastodisc. Orthologous to human RASEF (RAS and EF-hand domain containing).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Binding_site | IPR018247 | EF-Hand 1, calcium-binding site |
| Domain | IPR002048 | EF-hand domain |
| Domain | IPR005225 | Small GTP-binding domain |
| Family | IPR001806 | Small GTPase |
| Family | IPR050227 | Ras-related protein Rab |
| Homologous_superfamily | IPR011992 | EF-hand domain pair |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Additional Resources | Length | EF-Hand 1, calcium-binding site | EF-hand domain | EF-hand domain pair | P-loop containing nucleoside triphosphate hydrolase | Ras-related protein Rab | Small GTPase | Small GTP-binding domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A5WW21 | InterPro | 663 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zgc:162879-201
(1)
|
Ensembl | 2,570 nt | ||
| ncRNA |
zgc:162879-002
(1)
|
Ensembl | 594 nt | ||
| ncRNA |
zgc:162879-003
(1)
|
Ensembl | 748 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers