ZFIN is now using GRCz12tu for Genomic Data
Gene
fibcd1b
- ID
- ZDB-GENE-070424-245
- Name
- fibrinogen C domain containing 1b
- Symbol
- fibcd1b Nomenclature History
- Previous Names
-
- fibcd1
- si:dkey-54o1.1
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable chitin binding activity and metal ion binding activity. Predicted to be located in membrane. Predicted to be active in extracellular matrix and extracellular space. Orthologous to human FIBCD1 (fibrinogen C domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020837 | Fibrinogen, conserved site |
| Domain | IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain |
| Family | IPR050373 | Fibrinogen C-terminal domain-containing protein |
| Homologous_superfamily | IPR014716 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 |
| Homologous_superfamily | IPR036056 | Fibrinogen-like, C-terminal |
Domain Details Per Protein
| Protein | Additional Resources | Length | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | Fibrinogen, conserved site | Fibrinogen C-terminal domain-containing protein | Fibrinogen-like, C-terminal |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BJ76 | InterPro | 492 | |||||
| UniProtKB:A5PMA3 | InterPro | 461 | |||||
| UniProtKB:A0A2R8QRA8 | InterPro | 464 | |||||
| UniProtKB:A0AB32TPH8 | InterPro | 439 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
fibcd1-202
(1)
|
Ensembl | 1,768 nt | ||
| mRNA |
fibcd1-203
(1)
|
Ensembl | 1,395 nt | ||
| ncRNA |
fibcd1-002
(1)
|
Ensembl | 567 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers