Gene

taf4b

ID
ZDB-GENE-070424-105
Name
TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
Symbol
taf4b Nomenclature History
Previous Names
  • si:ch1073-421n16.1
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have DNA binding activity and transcription factor binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to transcription factor TFIID complex. Human ortholog(s) of this gene implicated in spermatogenic failure 13. Orthologous to human TAF4B (TATA-box binding protein associated factor 4b).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With taf4b Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
spermatogenic failure 13 Alliance ?Spermatogenic failure 13 615841
Associated With taf4b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003894 TAFH/NHR1
Domain IPR007900 Transcription initiation factor TFIID component TAF4, C-terminal
Family IPR045144 Transcription initiation factor TFIID component TAF4
Homologous_superfamily IPR009072 Histone-fold
Homologous_superfamily IPR037249 TAFH/NHR1 domain superfamily
Domain Details Per Protein
Protein Length Histone-fold TAFH/NHR1 TAFH/NHR1 domain superfamily Transcription initiation factor TFIID component TAF4 Transcription initiation factor TFIID component TAF4, C-terminal
UniProtKB:A0A8M6YWV6 833
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA taf4b-201 (1) Ensembl 2,834 nt
mRNA taf4b-202 (1) Ensembl 2,798 nt
mRNA taf4b-203 (1) Ensembl 3,059 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations