ZFIN is now using GRCz12tu for Genomic Data
Gene
trafd1
- ID
- ZDB-GENE-070410-43
- Name
- TRAF-type zinc finger domain containing 1
- Symbol
- trafd1 Nomenclature History
- Previous Names
-
- zgc:162228
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable zinc ion binding activity. Predicted to be involved in negative regulation of innate immune response. Predicted to be active in mitochondrion. Is expressed in intestine. Orthologous to human TRAFD1 (TRAF-type zinc finger domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Huang et al., 2024
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Innate Immunity and Apoptosis Regulator | TRAFD1/XAF1, zinc finger | Zinc finger, RING/FYVE/PHD-type | Zinc finger, TRAF-type |
|---|---|---|---|---|---|---|
| UniProtKB:A4IG51 | InterPro | 565 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trafd1-201
(1)
|
Ensembl | 2,785 nt | ||
| mRNA |
trafd1-202
(1)
|
Ensembl | 493 nt | ||
| ncRNA |
trafd1-002
(1)
|
Ensembl | 606 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers