ZFIN is now using GRCz12tu for Genomic Data
Gene
atp5if1a
- ID
- ZDB-GENE-070410-36
- Name
- ATP synthase inhibitory factor subunit 1a
- Symbol
- atp5if1a Nomenclature History
- Previous Names
-
- atpif1
- atpif1a
- pnt
- zgc:162207
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ATPase binding activity; ATPase inhibitor activity; and protein homodimerization activity. Involved in erythrocyte differentiation. Acts upstream of or within several processes, including optokinetic behavior; regulation of neuroinflammatory response; and visual perception. Predicted to be active in mitochondrion. Is expressed in blood; common myeloid progenitor; and heart. Used to study blindness. Orthologous to human ATP5IF1 (ATP synthase inhibitory factor subunit 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Human Disease | Fish | Conditions | Citations |
|---|---|---|---|
| blindness | atp5if1atq209/tq209 | standard conditions | Martín-Jiménez et al., 2018 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR007648 | Mitochondrial ATPase inhibitor |
Domain Details Per Protein
| Protein | Additional Resources | Length | Mitochondrial ATPase inhibitor |
|---|---|---|---|
| UniProtKB:A3KNL5 | InterPro PDB | 105 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
atp5if1a-202
(1)
|
Ensembl | 515 nt | ||
| mRNA |
atp5if1a-201
(1)
|
Ensembl | 530 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers