Gene
notchl
- ID
- ZDB-GENE-070220-2
- Name
- notch receptor, like
- Symbol
- notchl Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to act upstream of or within Notch signaling pathway and cell differentiation. Predicted to be located in endomembrane system and membrane. Is expressed in dorsal aorta and intersegmental vessel.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Gurung et al., 2022
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Ankyrin repeat | Ankyrin repeat-containing domain superfamily | Notch domain | Notch-like domain superfamily | Notch, NODP domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:X1WEZ2 | InterPro | 784 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
notchl-201
(1)
|
Ensembl | 2,939 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-376G11 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_002665009 (1) | 2952 nt | ||
| Genomic | GenBank:CU694532 (2) | 54710 nt | ||
| Polypeptide | UniProtKB:X1WEZ2 (1) | 784 aa |
No data available
- Gurung, S., Restrepo, N.K., Chestnut, B., Klimkaite, L., Sumanas, S. (2022) Single-cell transcriptomic analysis of vascular endothelial cells in zebrafish embryos. Scientific Reports. 12:13065
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Kanungo, J., Li, B.S., Goswami, M., Zheng, Y.L., Ramchandran, R., and Pant, H.C. (2007) Cloning and characterization of zebrafish (Danio rerio) cyclin-dependent kinase 5. Neuroscience letters. 412(3):233-238
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