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ZIRC
ZFIN ID: ZDB-GENE-070206-9
Gene Name: neurexin 3a
Gene Symbol: nrxn3a
Sequence Ontology ID : SO:0001217

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Previous Names: nrxn3aa, nrxn3ab, im:7144250, wu:fj54c11

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
Note: nrxn3a has two isoforms, alpha (2 forms DQ641432 and DQ641433) and beta (DQ641434)
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity. Predicted to be involved in angiogenesis and cell adhesion. Predicted to localize to the integral component of membrane. Orthologous to human NRXN3  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7144250]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019947Tg Transgenic Insertion Unknown Unknown DNA
la019948Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019949Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019950Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la027815Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa2921 Point Mutation Unknown Premature Stop ENU
    sa9245 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11330 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14031 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18056 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23034 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32142 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36371 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36372 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36373 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nrxn3a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nrxn3a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process angiogenesis (more)
    Cellular Component integral component of membrane (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA nrxn3a-004 (1) 788
    nrxn3a-005 (1) 776
    nrxn3a-006 (1) 437
    mRNA nrxn3a-203 (1) 2408
    aberrant processed transcript nrxn3a-204 (1) 2987
    mRNA nrxn3a-208 (1) 4008
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nrxn3a No data available
    MARKER RELATIONSHIPS
    nrxn3a Contained in: [BAC] CH211-154E6 (1) (order this), DKEY-109B24 (1) (order this), DKEY-153P6 (1) (order this), DKEY-245F17 (1) (order this), DKEYP-51D5 (1)
    nrxn3a Encodes: [EST] fj54c11, IMAGE:7144250 (1) (order this)
    [cDNA] MGC:174586 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080009 (1) 7351 bp
    Genomic GenBank:BX571723 (1) 201159 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A1XQX8 (1) 1697 aa
    Sequence Clusters UniGene:109337 (1)
    Sequence Information (all 68)
    ORTHOLOGY for nrxn3a ( Chr: 17 )
    CITATIONS (29)