Gene

ebf3a

ID
ZDB-GENE-070112-292
Name
EBF transcription factor 3a
Symbol
ebf3a Nomenclature History
Previous Names
  • ebf3
  • zgc:158829
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in brain and sensory system. Orthologous to human EBF3 (EBF transcription factor 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ebf3a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
hypotonia, ataxia, and delayed development syndrome Alliance Hypotonia, ataxia, and delayed development syndrome 617330
Associated With ebf3a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018350 Transcription factor COE, conserved site
Domain IPR002909 IPT domain
Domain IPR032200 Transcription factor COE, DNA-binding domain
Domain IPR032201 Transcription factor COE, helix-loop-helix domain
Domain IPR038006 Transcription factor COE, IPT domain
Family IPR003523 Transcription factor COE
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR014756 Immunoglobulin E-set
Homologous_superfamily IPR038173 Transcription factor COE, DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Immunoglobulin E-set Immunoglobulin-like fold IPT domain Transcription factor COE Transcription factor COE, conserved site Transcription factor COE, DNA-binding domain Transcription factor COE, DNA-binding domain superfamily Transcription factor COE, helix-loop-helix domain Transcription factor COE, IPT domain
UniProtKB:A0A286Y8W0 584
UniProtKB:A0A8M3B4V8 587
UniProtKB:A0A8M2B2S0 557
UniProtKB:A0A8M2B3A0 593
UniProtKB:A0A8M2B3A6 547
UniProtKB:A0A8M3AYM5 596
UniProtKB:A1L2E2 548
UniProtKB:A0A8M3BEC3 597
UniProtKB:A0A8M2B362 592
UniProtKB:A0A8M2B369 527
UniProtKB:A0A8M3B7N8 588
UniProtKB:A0A8M3AYP6 561
UniProtKB:A0A8M3BEC5 531
UniProtKB:A0A0R4IWI1 591
UniProtKB:A0A8M2B2G9 583
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ebf3a-206 (1) Ensembl 622 nt
mRNA ebf3a-207 (1) Ensembl 4,941 nt
mRNA ebf3a-208 (1) Ensembl 4,679 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations