Gene

arid6

ID

ZDB-GENE-070112-1882

Name

AT-rich interaction domain 6

Symbol

arid6 Nomenclature History

Previous Names

arid5b
zgc:158706

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to have DNA binding activity. Predicted to localize to nucleus.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With arid6 Human Ortholog

No data available

Associated With arid6 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001606	ARID DNA-binding domain
Family	IPR051232	AT-rich Interactive Domain/SWI1 Chromatin Remodeling
Homologous_superfamily	IPR036431	ARID DNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	ARID DNA-binding domain	ARID DNA-binding domain superfamily	AT-rich Interactive Domain/SWI1 Chromatin Remodeling
UniProtKB:A1L287 InterPro	603

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	arid6-201 (1) Ensembl	Ensembl		2,069 nt	Select Tool ZFIN BLAST
mRNA	arid6-202 (1) Ensembl	Ensembl		2,206 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations