ZFIN is now using GRCz12tu for Genomic Data
Gene
hfm1
- ID
- ZDB-GENE-061207-43
- Name
- helicase for meiosis 1
- Symbol
- hfm1 Nomenclature History
- Previous Names
-
- si:ch211-83f14.5
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable several functions, including 3'-5' DNA helicase activity; ATP binding activity; and zinc ion binding activity. Predicted to be involved in reciprocal meiotic recombination. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 9. Orthologous to human HFM1 (helicase for meiosis 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| primary ovarian insufficiency 9 | Alliance | Premature ovarian failure 9 | 615724 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR004179 | Sec63 domain |
| Domain | IPR011545 | DEAD/DEAH box helicase domain |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Family | IPR052247 | Meiotic Crossover Helicase |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036388 | Winged helix-like DNA-binding domain superfamily |
| Homologous_superfamily | IPR036390 | Winged helix DNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | DEAD/DEAH box helicase domain | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | Meiotic Crossover Helicase | P-loop containing nucleoside triphosphate hydrolase | Sec63 domain | Winged helix DNA-binding domain superfamily | Winged helix-like DNA-binding domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3APP0 | InterPro | 1045 | ||||||||
| UniProtKB:A0A8M9P056 | InterPro | 1461 | ||||||||
| UniProtKB:A0A8M3AX85 | InterPro | 1104 | ||||||||
| UniProtKB:A0AB32T2B3 | InterPro | 1481 | ||||||||
| UniProtKB:A0AB32T507 | InterPro | 1478 | ||||||||
| UniProtKB:A0AB32T657 | InterPro | 1496 | ||||||||
| UniProtKB:A0AB32T670 | InterPro | 1468 | ||||||||
| UniProtKB:A0AB32T9B5 | InterPro | 1494 | ||||||||
| UniProtKB:A0AB32TAZ3 | InterPro | 1483 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers