Gene

smpd5

ID
ZDB-GENE-061110-22
Name
sphingomyelin phosphodiesterase 5
Symbol
smpd5 Nomenclature History
Previous Names
  • smpdm
  • Mitochondrial SMase (1)
  • zgc:153995
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Exhibits sphingomyelin phosphodiesterase activity. Involved in glycosphingolipid metabolic process. Localizes to mitochondrial intermembrane space. Orthologous to human SMPD5 (sphingomyelin phosphodiesterase 5, pseudogene).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smpd5 Human Ortholog
No data available
Associated With smpd5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005135 Endonuclease/exonuclease/phosphatase
Family IPR017766 Sphingomyelinase C/phospholipase C
Family IPR038772 Sphingomyelinase C/Sphingomyelin phosphodiesterase 2-like
Homologous_superfamily IPR036691 Endonuclease/exonuclease/phosphatase superfamily
Domain Details Per Protein
Protein Length Endonuclease/exonuclease/phosphatase Endonuclease/exonuclease/phosphatase superfamily Sphingomyelinase C/phospholipase C Sphingomyelinase C/Sphingomyelin phosphodiesterase 2-like
UniProtKB:F1QG30
InterPro
545
UniProtKB:A0A2R8Q7Q7
InterPro
545
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smpd5-201 (1)
Ensembl
Ensembl 2,177 nt
ZFIN BLAST
mRNA smpd5-202 (1)
Ensembl
Ensembl 2,245 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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