ZFIN ID: ZDB-GENE-061013-428
Gene Name: actin filament associated protein 1-like 1b
Gene Symbol: afap1l1b    Nomenclature History

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Previous Names: sb:cb932, zgc:153096

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have SH3 domain binding activity. Predicted to localize to cytosol. Is expressed in cardiovascular system; neural crest; and ventral mesoderm. Orthologous to human AFAP1L1 (actin filament associated protein 1 like 1).
Genome Resources: Alliance (1),  Gene:768144 (1),  Ensembl(GRCz11):ENSDARG00000056453 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (13 images) from Thisse et al., 2001 [cb932]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa44971 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH afap1l1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH afap1l1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cytosol (more)
    Molecular Function SH3 domain binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA afap1l1b-201 (1)    Ensembl 2733
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM afap1l1b No data available
    MARKER RELATIONSHIPS
    afap1l1b Contained in: [BAC] DKEY-25L11 (1) (order this)
    afap1l1b Encodes: [EST] cb932 (1) (order this)
    [cDNA] MGC:153096 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001077287 (1)
    Genomic GenBank:CR749164 (1) 211000 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E9QFQ2 (1) 754 aa
    Sequence Information (all 16)
    ORTHOLOGY for afap1l1b ( Chr: 21 )
    CITATIONS (19)