ZFIN ID: ZDB-GENE-060929-776
Gene Name: contactin 4
Gene Symbol: cntn4
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:153573

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in axon guidance and cell adhesion; orthologous to several human genes including CNTN4 (contactin 4).
GENE EXPRESSION
All Expression Data: Fig. 3 from Gomez et al., 2012
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015934Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20800 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cntn4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cntn4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon guidance (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003598 (1)
  • InterPro:IPR003599 (1)
  • InterPro:IPR003961 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR013098 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR033007 (1)
  • InterPro:IPR036116 (1)
  • InterPro:IPR036179 (1)
  • PROSITE:PS50835 (1)
  • PROSITE:PS50853 (1)
  • Pfam:PF00041 (1)
  • Pfam:PF07679 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bx942846.1-201 (1) 1497
    cntn4-202 (1) 2815
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cntn4 No data available
    MARKER RELATIONSHIPS
    cntn4Contained in: [BAC] CH211-216C18 (1) (order this), CH211-230C4 (1) (order this), CH211-265O15 (1) (order this), RP71-85I8 (1) (order this)
    cntn4Encodes: [cDNA] MGC:153573 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080051 (1) 3463bp
    Genomic RefSeq:NW_018394665 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:F1QGN2 (1) 1028aa
    Sequence Clusters UniGene:115399 (1)
    Sequence Information (all 30)
    OTHER cntn4 GENE PAGES
  • Alliance (1)
  • Gene:571349 (1)
  • VEGA:OTTDARG00000038391 (1)
  • VEGA:OTTDARG00000042579 (1)
  • ORTHOLOGY for cntn4 (Chr: 6)
    CITATIONS (21)