Gene

agmat

ID

ZDB-GENE-060929-696

Name

agmatinase (putative)

Symbol

agmat Nomenclature History

Previous Names

zgc:153353 (1)

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to have agmatinase activity. Predicted to be involved in putrescine biosynthetic process from arginine, using agmatinase. Orthologous to human AGMAT (agmatinase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With agmat Human Ortholog

No data available

Associated With agmat Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Binding_site	IPR020855	Ureohydrolase, manganese-binding site
Family	IPR005925	Agmatinase-related
Family	IPR006035	Ureohydrolase
Homologous_superfamily	IPR023696	Ureohydrolase domain superfamily

Domain Details Per Protein

Protein	Length	Agmatinase-related	Ureohydrolase	Ureohydrolase domain superfamily	Ureohydrolase, manganese-binding site
UniProtKB:Q08C97 InterPro	366

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	agmat-201 (1) Ensembl	Ensembl		1,433 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations