ZFIN is now using GRCz12tu for Genomic Data
Gene
rbms3
- ID
- ZDB-GENE-060929-244
- Name
- RNA binding motif, single stranded interacting protein
- Symbol
- rbms3 Nomenclature History
- Previous Names
-
- zgc:153698
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Acts upstream of or within regulation of cartilage development and regulation of transforming growth factor beta receptor signaling pathway. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including brain; fin bud; hatching gland; otic vesicle; and tail bud. Orthologous to human RBMS3 (RNA binding motif single stranded interacting protein 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Jayasena et al., 2012
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR034406 | RBMS3, RNA recognition motif 2 |
| Family | IPR002343 | Paraneoplastic encephalomyelitis antigen |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleotide-binding alpha-beta plait domain superfamily | Paraneoplastic encephalomyelitis antigen | RBMS3, RNA recognition motif 2 | RNA-binding domain superfamily | RNA recognition motif domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3ATP9 | InterPro | 397 | |||||
| UniProtKB:F1QGV3 | InterPro | 415 | |||||
| UniProtKB:A0A8M3B1W9 | InterPro | 414 | |||||
| UniProtKB:A0A8M3AJD4 | InterPro | 398 | |||||
| UniProtKB:Q08C34 | InterPro | 381 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers