Gene

zgc:153292

ID

ZDB-GENE-060929-1098

Name

zgc:153292

Symbol

zgc:153292 Nomenclature History

Previous Names

im:6893131

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to have DNA binding activity and metal ion binding activity.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6893131 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With zgc:153292 Human Ortholog

No data available

Associated With zgc:153292 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006612	THAP-type zinc finger
Family	IPR026516	THAP domain-containing protein 1/10
Homologous_superfamily	IPR012337	Ribonuclease H-like superfamily
Homologous_superfamily	IPR036397	Ribonuclease H superfamily

Domain Details Per Protein

Protein	Length	Ribonuclease H-like superfamily	Ribonuclease H superfamily	THAP domain-containing protein 1/10	THAP-type zinc finger
UniProtKB:Q08CB6 InterPro	415
UniProtKB:A0A2R8QQZ2 InterPro	432
UniProtKB:A0A8M6Z3P9 InterPro	335

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	zgc:153292-201 (1) Ensembl	Ensembl		1,534 nt	Select Tool ZFIN BLAST
ncRNA	zgc:153292-002 (1) Ensembl	Ensembl		692 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations