Gene

washc2c

ID

ZDB-GENE-060825-87

Name

WASH complex subunit 2C

Symbol

washc2c Nomenclature History

Previous Names

fam21c (1)
wu:fb78c06
zgc:153646

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to enable phosphatidylinositol phosphate binding activity and retromer complex binding activity. Predicted to be involved in protein localization to endosome and retrograde transport, endosome to Golgi. Predicted to be located in early endosome membrane and plasma membrane. Predicted to be part of WASH complex. Predicted to be active in early endosome. Orthologous to several human genes including WASHC2A (WASH complex subunit 2A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With washc2c Human Ortholog

No data available

Associated With washc2c Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR029341	FAM21/CAPZIP domain

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M2B314	InterPro	1363
UniProtKB:A0A8M1RJ04	InterPro	1380
UniProtKB:A0A8M9Q511	InterPro	1349
UniProtKB:A0A8M9QA68	InterPro	1359
UniProtKB:A0A8M9PU38	InterPro	1381
UniProtKB:A0A8M9PU42	InterPro	1359
UniProtKB:A0A8M6Z9C4	InterPro	1363
UniProtKB:A0A8M2B2V0	InterPro	1381
UniProtKB:A0A8M9PMY0	InterPro	1363
UniProtKB:A0A8M9PBF7	InterPro	1380
UniProtKB:A0AB32SZR3	InterPro	1339
UniProtKB:A0AB32T6S4	InterPro	1358
UniProtKB:A0AB32T6V7	InterPro	1362
UniProtKB:A0AB32TJT9	InterPro	1363

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	washc2c-201 (1) Ensembl	Ensembl	2,840 nt	Select Tool ZFIN BLAST
mRNA	washc2c-202 (1) Ensembl	Ensembl	1,440 nt	Select Tool ZFIN BLAST
mRNA	washc2c-203 (1) Ensembl	Ensembl	1,069 nt	Select Tool ZFIN BLAST
mRNA	washc2c-204 (1) Ensembl	Ensembl	4,446 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations