Gene

slc4a5a

ID

ZDB-GENE-060531-64

Name

solute carrier family 4 member 5a

Symbol

slc4a5a Nomenclature History

Previous Names

si:ch211-48m9.1

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to enable sodium:bicarbonate symporter activity. Predicted to be involved in bicarbonate transport; regulation of intracellular pH; and transmembrane transport. Predicted to act upstream of or within monoatomic anion transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human SLC4A5 (solute carrier family 4 member 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With slc4a5a Human Ortholog

No data available

Associated With slc4a5a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR011531	Bicarbonate transporter-like, transmembrane domain
Domain	IPR013769	Band 3 cytoplasmic domain
Family	IPR003020	Bicarbonate transporter, eukaryotic
Family	IPR003024	Sodium bicarbonate cotransporter
Homologous_superfamily	IPR016152	Phosphotransferase/anion transporter

Domain Details Per Protein

Protein	Length	Band 3 cytoplasmic domain	Bicarbonate transporter, eukaryotic	Bicarbonate transporter-like, transmembrane domain	Phosphotransferase/anion transporter	Sodium bicarbonate cotransporter
UniProtKB:A0A8M9Q9D7 InterPro	1129
UniProtKB:A0A8M9QEL8 InterPro	1145
UniProtKB:A0A8M6YYE1 InterPro	1134

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	slc4a5a-201 (1) Ensembl	Ensembl		3,050 nt	Select Tool ZFIN BLAST
mRNA	slc4a5a-202 (1) Ensembl	Ensembl		6,689 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations