ZFIN is now using GRCz12tu for Genomic Data
Gene
si:ch211-225b11.4
- ID
- ZDB-GENE-060526-114
- Name
- si:ch211-225b11.4
- Symbol
- si:ch211-225b11.4 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable enzyme regulator activity. Predicted to be involved in tRNA nucleoside ribose methylation. Predicted to act upstream of or within tRNA processing. Orthologous to human THADA (THADA armadillo repeat containing).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR019442 | THADA/TRM732, DUF2428 |
| Domain | IPR056842 | tRNA (32-2'-O)-methyltransferase regulator THADA-like, C-terminal TPR repeats region |
| Domain | IPR056843 | tRNA (32-2'-O)-methyltransferase regulator THADA-like, TPR repeats region |
| Family | IPR051954 | tRNA (32-2'-O)-methyltransferase regulator THADA |
| Homologous_superfamily | IPR016024 | Armadillo-type fold |
Domain Details Per Protein
| Protein | Additional Resources | Length | Armadillo-type fold | THADA/TRM732, DUF2428 | tRNA (32-2'-O)-methyltransferase regulator THADA | tRNA (32-2'-O)-methyltransferase regulator THADA-like, C-terminal TPR repeats region | tRNA (32-2'-O)-methyltransferase regulator THADA-like, TPR repeats region |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4IJI1 | InterPro | 1848 | |||||
| UniProtKB:A0A8M6Z6F8 | InterPro | 1565 | |||||
| UniProtKB:A0A8M2BCI6 | InterPro | 1849 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-225b11.4-201
(1)
|
Ensembl | 1,521 nt | ||
| mRNA |
si:ch211-225b11.4-202
(1)
|
Ensembl | 5,547 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers